2025
Characterization of ZmSnRK1 genes and their response to aphid feeding, drought and cold stress
MEHMET AYDIN AKBUDAK, KÜBRA YILDIZ, DURMUŞ ÇETİN, ERTUĞRUL FİLİZ, UTKU YÜKSELBABA, Vibha Srivastava, Place of publication:Genetic Resources and Crop Evolution , 2025. https://dx.doi.org/10.1007/s10722-024-02006-2
2025
A genome sequence resource for the European chestnut (Castanea sativa Mill.) and the development of genic microsatellite markers
AYŞE ÖZGÜR UNCU, DURMUŞ ÇETİN, Vibha Srivastava, ALİ TEVFİK UNCU, MEHMET AYDIN AKBUDAK , Place of publication:Genetic Resources and Crop Evolution , 2025. https://dx.doi.org/10.1007/s10722-024-02181-2
2025
Arabidopsis BOR transporters and their regulation under boron toxicity
Seyma Nur ERDEGER, MEHMET AYDIN AKBUDAK, Place of publication:Rhizosphere, 2025. https://dx.doi.org/10.1016/j.rhisph.2025.101140
2024
Genome-wide exploration and analysis of plant stress-responsive CAMTA transcription factor genes in Brachypodium distachyon and their expression patterns under environmental challenges
MEHMET AYDIN AKBUDAK, DURMUŞ ÇETİN, ERTUĞRUL FİLİZ, Vibha Srivastava, Place of publication:South African Journal of Botany , 2024. https://dx.doi.org/10.1016/j.sajb.2024.01.048
2024
GpEF1A: a novel lysine methyltransferase gene from Gypsophila perfoliata L. involved in boron homeostasis
MEHMET AYDIN AKBUDAK, Nurefsan Cirik, Seyma Nur ERDEGER, ERTUĞRUL FİLİZ, SÜLEYMAN DOĞU, MELİKE BOR, Place of publication:Plant Biology, 2024. https://dx.doi.org/10.1111/plb.13658
2024
Assessment of the Developmental Profiles of ZHY3 and W303 Yeast Strains in Zinc-Modified Media
Beyza Yuksel, MEHMET AYDIN AKBUDAK, Place of publication: Adıyaman University Journal of Science , 2024. https://dx.doi.org/10.37094/adyujsci.1565012
2024
Cold stress impairs nitrogen uptake and enhances translocation through AMT1 and NRT2 gene regulation in tomato
DURMUŞ ÇETİN, MEHMET AYDIN AKBUDAK, Place of publication: Mediterranean Agricultural Sciences , 2024. https://dx.doi.org/10.29136/mediterranean.1540898
2024
Overexpression of the tomato pathogenesis-related gene SlPR-1.9 confers increased tolerance to salt stress in Arabidopsis thaliana
KÜBRA YILDIZ, MEHMET AYDIN AKBUDAK Place of publication: Mediterranean Agricultural Sciences, 2024. https://dx.doi.org/10.29136/mediterranean.1556782
2024
Identification and Functional Characterization of Glutamate Decarboxylase (GAD) Genes in Potato (Solanum tuberosum L.) and Analysis of Their Expression under Drought and Salt Stress Conditions
MEHMET AYDIN AKBUDAK , Place of publication: Adıyaman University Journal of Science , 2024. https://dx.doi.org/10.37094/adyujsci.1568022
2023
Genome-Wide Identification, Characterization and Expression Profiling of Potato (Solanum tuberosum) Frataxin (FH) Gene
FIRAT KURT, ERTUĞRUL FİLİZ, KÜBRA YILDIZ, MEHMET AYDIN AKBUDAK, Place of publication:Genes, 2023. https://dx.doi.org/10.3390/genes14020468
2022
Yeast Functional Screen to Determine cDNAs of European Alkali Grass (Puccinellia distans) Conferring Selenium (Se) Toxicity
Kubra BUDAK, MEHMET AYDIN AKBUDAK, Place of publication: Journal of Agricultural Sciences , 2022. https://dx.doi.org/10.5281/zenodo.7309543
2022
Mitochondrial iron transporter (MIT) gene in potato (Solanum tuberosum): comparative bioinformatics, physiological and expression analyses in response to drought and salinity
FIRAT KURT, BARIŞ KURT, ERTUĞRUL FİLİZ, Kubra Yildiz, MEHMET AYDIN AKBUDAK, Place of publication:BioMetals , 2022. https://dx.doi.org/10.1007/s10534-022-00411-7
2022
Genome-wide identification and characterization of high-affinity nitrate transporter 2 (NRT2) gene family in tomato (Solanum lycopersicum) and their transcriptional responses to drought and salinity stresses
MEHMET AYDIN AKBUDAK, ERTUĞRUL FİLİZ, DURMUŞ ÇETİN , Place of publication:Journal of Plant Physiology , 2022. https://dx.doi.org/10.1016/j.jplph.2022.153684
2021
Antiproliferative Effect of Epilobium parviflorum Extracts on Colorectal Cancer Cell Line HT-29
MEHMET AYDIN AKBUDAK, Tevhide SUT, NURANİYE ERUYGUR, ERSİN AKINCI , Place of publication:Romanian Biotechnological Letters , 2021. https://dx.doi.org/10.25083/rbl/26.6/3120-3128
2021
Genes involved in mRNA surveillance are induced in Brachypodium distachyon under cadmium toxicity
EMRE AKSOY, ALİ TEVFİK UNCU, ERTUĞRUL FİLİZ, ŞULE ORMAN, DURMUŞ ÇETİN, MEHMET AYDIN AKBUDAK , Place of publication:Springer Science and Business Media LLC , 2021. https://dx.doi.org/10.1007/s11033-021-06952-3
2020
Genome-wide investigation of proline transporter (ProT) gene family in tomato: Bioinformatics and expression analyses in response to drought stress
MEHMET AYDIN AKBUDAK, ERTUĞRUL FİLİZ , Place of publication:Plant Physiology and Biochemistry , 2020.
2020
Novel TALEN-generated mCitrine-FANCD2 fusion reporter mouse model for in vivo research of DNA damage response
Maja Sabol, MEHMET AYDIN AKBUDAK, Dominika Truban, Inken Beck, Radislav Sedlacek, Place of publication:DNA REPAIR , 2020. https://dx.doi.org/10.1016/j.dnarep.2020.102936
2020
Pathogenesis related protein-1 (PR-1) genes in tomato (Solanum lycopersicum L.): Bioinformatics analyses and expression profiles in response to drought stress
MEHMET AYDIN AKBUDAK, Sukran Yildiz, ERTUĞRUL FİLİZ, Place of publication:Genomics , 2020.
2020
Investigation of PIC1 (permease in chloroplasts 1) gene’s role in iron homeostasis: bioinformatics and expression analyses in tomato and sorghum
ERTUĞRUL FİLİZ, MEHMET AYDIN AKBUDAK, Place of publication:BioMetals , 2020. https://dx.doi.org/10.1007/s10534-019-00228-x
2020
Ammonium transporter 1 (AMT1) gene family in tomato (Solanum lycopersicum L.): Bioinformatics, physiological and expression analyses under drought and salt stresses
Ertugrul Filiz, MEHMET AYDIN AKBUDAK, Place of publication:Genomics, 2020.
2020
Sodyum azid (NaN3) ile muamele edilen arpa mutantlarının genetik çeşitliliğinin ISSR markörler ile belirlenmesi
HÜSEYİN GÜNGÖR, MEHMET AYDIN AKBUDAK, ERTUĞRUL FİLİZ, İlker YÜCE, ZİYA DUMLUPINAR, Place of publication:Derim , 2020. https://dx.doi.org/10.16882/derim.2020.630502
2019
Genome-wide analyses of ATP sulfurylase (ATPS) genes in higher plants and expression profiles in sorghum (Sorghum bicolor) under cadmium and salinity stresses
MEHMET AYDIN AKBUDAK, Ertugrul Filiz , Place of publication:Genomics , 2019. https://dx.doi.org/10.1016/j.ygeno.2018.03.013
2019
Aromatic amino acids biosynthesis genes identification and expression analysis under salt and drought stresses in Solanum lycopersicum L.
Ertugrul Filiz, Cetin Durmus, MEHMET AYDIN AKBUDAK, Place of publication:SCIENTIA HORTICULTURAE , 2019. https://dx.doi.org/10.1016/j.scienta.2019.02.044
2019
Identification of O-acetylserine(thiol)lyase (OASTL) genes in sorghum (Sorghum bicolor) and gene expression analysis under cadmium stress
MEHMET AYDIN AKBUDAK, Senem Uylas, Ertugrul Filiz, Place of publication:Molecular Biology Reports , 2019. ttps://dx.doi.org/10.1007/s11033-018-4477-0
2019
Whirly (Why) transcription factors in tomato (Solanum lycopersicum L.): genome-wide identification and transcriptional profiling under drought and salt stresses
MEHMET AYDIN AKBUDAK, Ertugrul Filiz, Place of publication:Molecular Biology Reports , 2019. https://dx.doi.org/10.1007/s11033-019-04863-y
2019
Expression patterns of ROS responsive genes on boron-stressed canola (Brassicanapus ssp. oleifera L.) following selenium treatment
Melahat Ozge ÖZEN, Seyda KAYA, Senem UYLAŞ, Cetin Durmus, ESİN ARI, MEHMET AYDIN AKBUDAK, Place of publication:Mediterranean Agricultural Sciences , 2019. https://dx.doi.org/10.29136/mediterranean.500611
2018
EVALUATING GENOTYPIC VARIATIONS AMONGDROUGHT-INDUCED SORGHUM CULTIVARS FORASCORBATE PEROXIDASES (APXS)
MEHMET AYDIN AKBUDAK , Place of publication:Fresenius Environmental Bulletin , 2018.
2018
Estimation of Nuclear DNA Content and Determination of Relationship Between Altitude and Genome Size of USDA Turkish Oat (Avena spp.) Collection
MEHMET AYDIN AKBUDAK, Muhammet Şakiroğlu, METİN TUNA , Place of publication:Gesunde Pflanzen , 2018. https://dx.doi.org/10.1007/s10343-018-0428-x
2018
Genome-Wide Identification and Expression Profiling of Ascorbate Peroxidase (APX) and Glutathione Peroxidase (GPX) Genes Under Drought Stress in Sorghum (Sorghum bicolor L.)
MEHMET AYDIN AKBUDAK, Ertugrul Filiz, Recep Vatansever, Kubra Kontbay Place of publication:Journal of Plant Growth Regulation , 2018. https://dx.doi.org/10.1007/s00344-018-9788-9
2018
DREB2 (dehydration-responsive element-binding protein 2) type transcription factor in sorghum (Sorghum bicolor): genome-wide identification, characterization and expression profiles under cadmium and salt stresses
MEHMET AYDIN AKBUDAK, Ertugrul Filiz, Kubra Kontbay, Place of publication:3 Biotech , 2018. https://dx.doi.org/10.1007/s13205-018-1454-1
2018
Genome-wide identification and cadmium induced expression profiling of sulfate transporter (SULTR) genes in sorghum (Sorghum bicolor L.)
MEHMET AYDIN AKBUDAK, Ertugrul Filiz, Kubra Kontbay, Place of publication:BioMetals , 2018. https://dx.doi.org/10.1007/s10534-017-0071-5
2018
Sorgum (Sorghum bicolor L.)’ da Sülfat Taşıyıcı (SULTR) Genlerin Kuraklık Stresi Altında İfadelerinin Belirlenmesi
MEHMET AYDIN AKBUDAK, Place of publication:Mediterranean Agricultural Sciences , 2018. https://dx.doi.org/10.29136/mediterranean.393096
2018
Farklı türlere ait yulaf aksesyonlarının genom büyüklüklerinin belirlenmesi ve ploidi seviyelerinin tespiti
MEHMET AYDIN AKBUDAK, Ahmet PAKSOY, METİN TUNA , Place of publication:Mediterranean Agricultural Sciences , 2018. https://dx.doi.org/10.29136/mediterranean.363716
2017
Down-regulation of hydroxycinnamoyl CoA: shikimate hydroxycinnamoyl transferase, cinnamoyl CoA reductase, and cinnamyl alcohol dehydrogenase leads to lignin reduction in rice (Oryza sativa L. ssp. japonica cv. Nipponbare)
Sathish Ponniah, Zhenhua Shang, MEHMET AYDIN AKBUDAK, Vibha Srivastava, Manoharan Muthusamy , Place of publication:Plant Biotechnology Reports , 2017. https://dx.doi.org/10.1007/s11816-017-0426-y
2017
Effect of gene order in DNA constructs on gene expression upon integration into plant genome
MEHMET AYDIN AKBUDAK, Vibha Srivastava , Place of publication:3 Biotech , 2017. https://dx.doi.org/10.1007/s13205-017-0729-2
2017
Yeni Nesil Genom Düzenleme Teknikleri: ZFN, TALEN, CRISPR’lar ve Bitkilerde Kullanımı
MEHMET AYDIN AKBUDAK, Kubra Kontbay , Place of publication:Tarla Bitkileri Merkez Araştırma Enstitüsü Dergisi , 2017. https://dx.doi.org/10.21566/tarbitderg.323614
2014
Strong activity of FLPe recombinase in rice plants does not correlate with the transmission of the recombined locus to the progeny
Linh D Nguyen,Jamie L Underwood, Soumen Nandy, MEHMET AYDIN AKBUDAK, Vibha Srivastava , Place of publication:Plant Biotechnology Reports , 2014. https://dx.doi.org/10.1007/s11816-014-0332-5
2013
Suppression of Arabidopsis genes by terminator less transgene constructs
MEHMET AYDIN AKBUDAK, Scott J Nicholson, Vibha Srivastava , Place of publication:Plant Biotechnology Reports , 2013. https://dx.doi.org/10.1007/s11816-013-0278-z
2011
Improved FLP Recombinase FLPe Efficiently Removes Marker Gene from Transgene Locus Developed by Cre lox Mediated Site Specific Gene Integration in Rice
MEHMET AYDIN AKBUDAK, Srivastava Vibha , Place of publication:Molecular Biotechnology , 2011. https://dx.doi.org/10.1007/s12033-011-9381-y
2010
Dosage Dependent Gene Expression from Direct Repeat Locus in Rice Developed by Site Specific Gene Integration
MEHMET AYDIN AKBUDAK, Anjali B More, Nandy Soumen, Srivastava Vibha, MELEK MUTLU SÖNMEZ , Place of publication:Molecular Biotechnology , 2010. https://dx.doi.org/10.1007/s12033-009-9235-z